10,740 research outputs found

    Restoration of eucalypt grassy woodland: effects of experimental interventions on ground-layer vegetation

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    We report on the effects of broad-scale restoration treatments on the ground layer of eucalypt grassy woodland in south-eastern Australia. The experiment was conducted in two conservation reserves from which livestock grazing had previously been removed. Changes in biomass, species diversity, ground-cover attributes and life-form were analysed over a 4-year period in relation to the following experimental interventions: (1) reduced kangaroo density, (2) addition of coarse woody debris and (3) fire (a single burn). Reducing kangaroo density doubled total biomass in one reserve, but no effects on exotic biomass, species counts or ground cover attributes were observed. Coarse woody debris also promoted biomass, particularly exotic annual forbs, as well as plant diversity in one of the reserves. The single burn reduced biomass, but changed little else. Overall, we found the main driver of change to be the favourable growth seasons that had followed a period of drought. This resulted in biomass increasing by 67%, (mostly owing to the growth of perennial native grasses), whereas overall native species counts increased by 18%, and exotic species declined by 20% over the 4-year observation period. Strategic management of grazing pressure, use of fire where biomass has accumulated and placement of coarse woody debris in areas of persistent erosion will contribute to improvements in soil and vegetation condition, and gains in biodiversity, in the future.Funding and in-kind logistic support for this project was provided by the ACT Government as part of an Australian Research Council Linkage Grant (LP0561817; LP110100126). Drafts of the manuscript were read by Saul Cunningham and Ben Macdonald

    Measurements of greenhouse gases and related tracers at Bialystok tall tower station in Poland

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    Quasi-continuous, in-situ measurements of atmospheric CO2, O2/N2, CH4, CO, N2O, and SF6 have been performed since August 2005 at the tall tower station near Bialystok, in Eastern Poland, from five heights up to 300 m. Besides the in-situ measurements, flask samples are filled approximately weekly and measured at Max-Planck Institute for Biogeochemistry for the same species and, in addition, for H2, Ar/N2 and the stable isotopes 13C and 18O in CO2. The in-situ measurement system was built based on commercially available analysers: a LiCor 7000 for CO2, a Sable Systems "Oxzilla" FC-2 for O2, and an Agilent 6890 gas chromatograph for CH4, CO, N2O and SF6. The system was optimized to run continuously with very little maintenance and to fulfill the precision requirements of the CHIOTTO project. The O2/N2 measurements in particular required special attention in terms of technical setup and quality assurance. The evaluation of the performance after more than three years of operation gave overall satisfactory results, proving that this setup is suitable for long term remote operation with little maintenance. The precision achieved for all species is within or close to the project requirements. The comparison between the in-situ and flask sample results, used to verify the accuracy of the in-situ measurements, showed no significant difference for CO2, O2/N2, CH4 and N2O, and a very small difference for SF6. The same comparison however revealed a statistically significant difference for CO, of about 6.5 ppb, for which the cause could not be fully explained. From more than three years of data, the main features at Bialystok have been characterized in terms of variability, trends, and seasonal and diurnal variations. CO2 and O2/N2 show large short term variability, and large diurnal signals during the warm seasons, which attenuate with the increase of sampling height. The trends calculated from this dataset, over the period August 2005 to December 2008, are 2.02±0.46 ppm/year for CO2 and -23.2±2.5 per meg/year for O2/N2. CH4, CO and N2O show also higher variability at the lower sampling levels, which in the case of CO is strongly seasonal. Diurnal variations in CH4, CO and N2O mole fractions can be observed during the warm season, due to the periodicity of vertical mixing combined with the diurnal cycle of anthropogenic emissions. We calculated increase rates of 10.1±4.4 ppb/year for CH4, (-8.3)±5.3 ppb/year for CO and 0.67±0.08 ppb/year for N2O. SF6 shows only few events, and generally no vertical gradients, which suggests that there are no significant local sources. A weak SF6 seasonal cycle has been detected, which most probably is due to the seasonality of atmospheric circulation. SF6 increased during the time of our measurement at an average rate of 0.29±0.01 ppt/year

    Topological entropy and blocking cost for geodesics in riemannian manifolds

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    For a pair of points x,yx,y in a compact, riemannian manifold MM let nt(x,y)n_t(x,y) (resp. st(x,y)s_t(x,y)) be the number of geodesic segments with length ≀t\leq t joining these points (resp. the minimal number of point obstacles needed to block them). We study relationships between the growth rates of nt(x,y)n_t(x,y) and st(x,y)s_t(x,y) as t→∞t\to\infty. We derive lower bounds on st(x,y)s_t(x,y) in terms of the topological entropy h(M)h(M) and its fundamental group. This strengthens the results of Burns-Gutkin \cite{BG06} and Lafont-Schmidt \cite{LS}. For instance, by \cite{BG06,LS}, h(M)>0h(M)>0 implies that ss is unbounded; we show that ss grows exponentially, with the rate at least h(M)/2h(M)/2.Comment: 13 page

    Scaling and Universality in the Counterion-Condensation Transition at Charged Cylinders

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    We address the critical and universal aspects of counterion-condensation transition at a single charged cylinder in both two and three spatial dimensions using numerical and analytical methods. By introducing a novel Monte-Carlo sampling method in logarithmic radial scale, we are able to numerically simulate the critical limit of infinite system size (corresponding to infinite-dilution limit) within tractable equilibration times. The critical exponents are determined for the inverse moments of the counterionic density profile (which play the role of the order parameters and represent the inverse localization length of counterions) both within mean-field theory and within Monte-Carlo simulations. In three dimensions (3D), correlation effects (neglected within mean-field theory) lead to an excessive accumulation of counterions near the charged cylinder below the critical temperature (condensation phase), while surprisingly, the critical region exhibits universal critical exponents in accord with the mean-field theory. In two dimensions (2D), we demonstrate, using both numerical and analytical approaches, that the mean-field theory becomes exact at all temperatures (Manning parameters), when number of counterions tends to infinity. For finite particle number, however, the 2D problem displays a series of peculiar singular points (with diverging heat capacity), which reflect successive de-localization events of individual counterions from the central cylinder. In both 2D and 3D, the heat capacity shows a universal jump at the critical point, and the energy develops a pronounced peak. The asymptotic behavior of the energy peak location is used to locate the critical temperature, which is also found to be universal and in accordance with the mean-field prediction.Comment: 31 pages, 16 figure

    Superfluid Friction and Late-time Thermal Evolution of Neutron Stars

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    The recent temperature measurements of the two older isolated neutron stars PSR 1929+10 and PSR 0950+08 (ages of 3×1063\times 10^6 and 2×1072\times 10^7 yr, respectively) indicate that these objects are heated. A promising candidate heat source is friction between the neutron star crust and the superfluid it is thought to contain. We study the effects of superfluid friction on the long-term thermal and rotational evolution of a neutron star. Differential rotation velocities between the superfluid and the crust (averaged over the inner crust moment of inertia) of ωˉ∌0.6\bar\omega\sim 0.6 rad s−1^{-1} for PSR 1929+10 and ∌0.02\sim 0.02 rad s−1^{-1} for PSR 0950+08 would account for their observed temperatures. These differential velocities could be sustained by pinning of superfluid vortices to the inner crust lattice with strengths of ∌\sim 1 MeV per nucleus. Pinned vortices can creep outward through thermal fluctuations or quantum tunneling. For thermally-activated creep, the coupling between the superfluid and crust is highly sensitive to temperature. If pinning maintains large differential rotation (∌10\sim 10 rad s−1^{-1}), a feedback instability could occur in stars younger than ∌105\sim 10^5 yr causing oscillations of the temperature and spin-down rate over a period of ∌0.3tage\sim 0.3 t_{\rm age}. For stars older than ∌106\sim 10^6 yr, however, vortex creep occurs through quantum tunneling, and the creep velocity is too insensitive to temperature for a thermal-rotational instability to occur. These older stars could be heated through a steady process of superfluid friction.Comment: 26 pages, 1 figure, submitted to Ap

    Mechanical response of plectonemic DNA: an analytical solution

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    We consider an elastic rod model for twisted DNA in the plectonemic regime. The molecule is treated as an impenetrable tube with an effective, adjustable radius. The model is solved analytically and we derive formulas for the contact pressure, twisting moment and geometrical parameters of the supercoiled region. We apply our model to magnetic tweezer experiments of a DNA molecule subjected to a tensile force and a torque, and extract mechanical and geometrical quantities from the linear part of the experimental response curve. These reconstructed values are derived in a self-contained manner, and are found to be consistent with those available in the literature.Comment: 14 pages, 4 figure

    Not all surveillance data are created equal—A multi‐method dynamic occupancy approach to determine rabies elimination from wildlife

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    1. A necessary component of elimination programmes for wildlife disease is effective surveillance. The ability to distinguish between disease freedom and non‐detection can mean the difference between a successful elimination campaign and new epizootics. Understanding the contribution of different surveillance methods helps to optimize and better allocate effort and develop more effective surveillance programmes. 2. We evaluated the probability of rabies virus elimination (disease freedom) in an enzootic area with active management using dynamic occupancy modelling of 10 years of raccoon rabies virus (RABV) surveillance data (2006–2015) collected from three states in the eastern United States. We estimated detection probability of RABV cases for each surveillance method (e.g. strange acting reports, roadkill, surveillance‐trapped animals, nuisance animals and public health samples) used by the USDA National Rabies Management Program. 3. Strange acting, found dead and public health animals were the most likely to detect RABV when it was present, and generally detectability was higher in fall– winter compared to spring–summer. Found dead animals in fall–winter had the highest detection at 0.33 (95% CI: 0.20, 0.48). Nuisance animals had the lowest detection probabilities (~0.02). 4. Areas with oral rabies vaccination (ORV) management had reduced occurrence probability compared to enzootic areas without ORV management. RABV occurrence was positively associated with deciduous and mixed forests and medium to high developed areas, which are also areas with higher raccoon (Procyon lotor) densities. By combining occupancy and detection estimates we can create a probability of elimination surface that can be updated seasonally to provide guidance on areas managed for wildlife disease. 5. Synthesis and applications. Wildlife disease surveillance is often comprised of a combination of targeted and convenience‐based methods. Using a multi‐method analytical approach allows us to compare the relative strengths of these methods, providing guidance on resource allocation for surveillance actions. Applying this multi‐method approach in conjunction with dynamic occupancy analyses better informs management decisions by understanding ecological drivers of disease occurrence

    Word Embeddings for Entity-annotated Texts

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    Learned vector representations of words are useful tools for many information retrieval and natural language processing tasks due to their ability to capture lexical semantics. However, while many such tasks involve or even rely on named entities as central components, popular word embedding models have so far failed to include entities as first-class citizens. While it seems intuitive that annotating named entities in the training corpus should result in more intelligent word features for downstream tasks, performance issues arise when popular embedding approaches are naively applied to entity annotated corpora. Not only are the resulting entity embeddings less useful than expected, but one also finds that the performance of the non-entity word embeddings degrades in comparison to those trained on the raw, unannotated corpus. In this paper, we investigate approaches to jointly train word and entity embeddings on a large corpus with automatically annotated and linked entities. We discuss two distinct approaches to the generation of such embeddings, namely the training of state-of-the-art embeddings on raw-text and annotated versions of the corpus, as well as node embeddings of a co-occurrence graph representation of the annotated corpus. We compare the performance of annotated embeddings and classical word embeddings on a variety of word similarity, analogy, and clustering evaluation tasks, and investigate their performance in entity-specific tasks. Our findings show that it takes more than training popular word embedding models on an annotated corpus to create entity embeddings with acceptable performance on common test cases. Based on these results, we discuss how and when node embeddings of the co-occurrence graph representation of the text can restore the performance.Comment: This paper is accepted in 41st European Conference on Information Retrieva

    Transabdominal ultrasonographic evaluation of fetal well-being in the late-term mare and cow

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    In the equine practice, attempts have been made to examine the fetus in the second and third trimester of pregnancy but all of the available methods have limitations. Until now, transabdominal ultrasonography has been regarded as the most informative examination. This method allows us to measure fetal heart rate, fetal activity as well as the quality and quantity of the fetal fluids. A modified biophysical profile for horses was used by several researchers in the USA from the 1990s as a gold standard. However, it is not sensitive enough and, in the authors’ experience, professionals can face difficulties during its application (e.g. for measuring aortic diameter and fetal breathing movements). In cows, this method was first used for this purpose by a Canadian research group in 2007. They reported that transabdominal ultrasound was promising but showed low sensitivity in this species. The present studies show that birth weight cannot be predicted from fetal aortic diameter measurement in cows as suggested by other researchers. Transabdominal ultrasound needs special equipment (2–3.5 MHz convex transducer) and basic ultrasonographic knowledge; however, we suggest that in most cases it can be performed with the dam placed in a stock and without shaving the examination area. The method provides useful information within 30–40 minutes, enabling the examiner to determine whether or not the fetus is alive and to recognise placentitis or twins. This technique also allows measuring the combined thickness of the uteroplacental unit, and the authors’ ongoing study showed higher normal values in Lipizzaner mares compared to values in other breeds. In conclusion, with the help of advanced techniques, simple and low-cost methods should be developed for the evaluation of the pregnant dam and its fetus to assess fetal viability in the veterinary practice
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